euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

204 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip24 chr1 9141337 9141337 . unknown germline . no 239 SLC2A5
srip602 chr1 46453454 46453454 - unknown germline . no 239 MAST2
srip819 chr1 56405388 56405388 . unknown germline . no 239 LOC100507652
srip1816 chr1 75192898 75192898 - unknown germline . no 239 CRYZ
srip2812 chr1 101978986 101978986 - unknown germline . no 239 .
srip3322 chr1 106396420 106396420 - unknown germline . no 239 .
srip3627 chr1 114088513 114088513 - unknown germline . no 239 MAGI3
srip5805 chr1 192008674 192008674 - unknown germline . no 239 .
srip6993 chr1 225272510 225272510 + unknown germline . no 239 DNAH14
srip7381 chr1 242311569 242311569 + unknown germline . no 239 PLD5
srip8468 chr10 25707693 25707693 - unknown germline . no 239 GPR158
srip8796 chr10 38872138 38872138 . unknown germline . no 239 .
srip8805 chr10 39120249 39120249 . unknown germline . no 239 .
srip8806 chr10 42395331 42395331 . unknown germline . no 239 .
srip9813 chr10 82972200 82972200 . unknown germline . no 239 .
srip11824 chr10 124455224 124455224 + unknown germline . no 239 .
srip12324 chr11 10042445 10042445 - unknown germline . no 239 SBF2
srip12550 chr11 15380252 15380252 + unknown germline . no 239 .
srip13823 chr11 33670130 33670130 + unknown germline . no 239 C11orf41
srip14248 chr11 41831803 41831803 - unknown germline . no 239 .
srip14726 chr11 48360744 48360744 - unknown germline . no 239 .
srip14857 chr11 48861834 48861834 . unknown germline . no 239 .
srip14864 chr11 48933117 48933117 - unknown germline . no 239 .
srip15164 chr11 57967341 57967341 . unknown germline . no 239 .
srip15861 chr11 67599056 67599056 + unknown germline . no 239 LOC100421859
srip16529 chr11 83652358 83652358 - unknown germline . no 239 DLG2
srip17187 chr11 94684368 94684368 + unknown germline . no 239 .
srip17287 chr11 97067484 97067484 - unknown germline . no 239 .
srip18338 chr11 121131527 121131527 - unknown germline . no 239 .
srip19285 chr11 134305645 134305645 - unknown germline . no 239 .
srip19673 chr12 9515249 9515249 . unknown germline . no 239 .
srip19900 chr12 11219195 11219195 - unknown germline . no 239 PRH1-PRR4
srip20151 chr12 12933687 12933687 - unknown germline . no 239 APOLD1
srip21170 chr12 34017331 34017331 - unknown germline . no 239 .
srip22227 chr12 43256979 43256979 - unknown germline . no 239 .
srip22901 chr12 53413240 53413240 - unknown germline . no 239 EIF4B
srip23980 chr12 79338030 79338030 - unknown germline . no 239 SYT1
srip24404 chr12 84955208 84955208 - unknown germline . no 239 .
srip26894 chr13 22489798 22489798 + unknown germline . no 239 .
srip27825 chr13 38052324 38052324 + unknown germline . no 239 .
srip27863 chr13 40370536 40370536 + unknown germline . no 239 .
srip28005 chr13 42771398 42771398 + unknown germline . no 239 DGKH
srip29068 chr13 61462340 61462340 - unknown germline . no 239 .
srip29650 chr13 61734491 61734491 . unknown germline . no 239 .
srip30636 chr13 78693217 78693217 + unknown germline . no 239 .
srip30969 chr13 79259790 79259790 - unknown germline . no 239 .
srip31579 chr13 85871607 85871607 - unknown germline . no 239 .
srip31993 chr13 86340151 86340151 - unknown germline . no 239 .
srip33512 chr13 104296230 104296230 - unknown germline . no 239 .
srip35509 chr14 31193463 31193463 - unknown germline . no 239 SCFD1
srip35883 chr14 36674754 36674754 + unknown germline . no 239 .
srip36310 chr14 39875089 39875089 + unknown germline . no 239 FBXO33
srip37345 chr14 59220395 59220395 + unknown germline . no 239 .
srip38641 chr14 86381803 86381803 - unknown germline . no 239 .
srip38934 chr14 103959585 103959585 + unknown germline . no 239 MARK3
srip39335 chr15 28175795 28175795 - unknown germline . no 239 OCA2
srip40238 chr15 47507335 47507335 - unknown germline . no 239 SEMA6D
srip41038 chr15 55850511 55850511 + unknown germline . no 239 PYGO1
srip41725 chr15 62169645 62169645 - unknown germline . no 239 VPS13C
srip42250 chr15 76971661 76971661 + unknown germline . no 239 SCAPER
srip42527 chr15 83551628 83551628 - unknown germline . no 239 HOMER2
srip43256 chr15 100931152 100931152 - unknown germline . no 239 .
srip43480 chr16 6119007 6119007 + unknown germline . no 239 RBFOX1
srip44030 chr16 14545738 14545738 . unknown germline . no 239 PARN
srip46316 chr16 71028016 71028016 + unknown germline . no 239 HYDIN
srip46405 chr16 76865783 76865783 - unknown germline . no 239 .
srip46539 chr17 6341639 6341639 - unknown germline . no 239 .
srip46825 chr17 15511186 15511186 + unknown germline . no 239 CDRT1
srip47199 chr17 28398310 28398310 + unknown germline . no 239 EFCAB5
srip48357 chr17 68357403 68357403 + unknown germline . no 239 .
srip48591 chr17 78204953 78204953 . unknown germline . no 239 SLC26A11
srip48979 chr18 15095255 15095255 - unknown germline . no 239 .
srip49169 chr18 27219193 27219193 - unknown germline . no 239 .
srip49796 chr18 41550313 41550313 . unknown germline . no 239 .
srip50027 chr18 49216225 49216225 - unknown germline . no 239 .
srip50390 chr18 51488332 51488332 - unknown germline . no 239 .
srip50738 chr18 51762737 51762737 - unknown germline . no 239 .
srip50818 chr18 52396133 52396133 + unknown germline . no 239 .
srip51826 chr18 74960069 74960069 - unknown germline . no 239 .
srip52209 chr19 27760557 27760557 + unknown germline . no 239 .
srip52319 chr19 27905312 27905312 + unknown germline . no 239 .
srip52528 chr19 55509971 55509971 . unknown germline . no 239 NLRP2
srip53475 chr2 23191008 23191008 - unknown germline . no 239 .
srip54644 chr2 42051410 42051410 + unknown germline . no 239 .
srip56224 chr2 82098035 82098035 + unknown germline . no 239 .
srip57749 chr2 129573987 129573987 + unknown germline . no 239 .
srip58245 chr2 141852915 141852915 - unknown germline . no 239 LRP1B
srip59207 chr2 147020925 147020925 + unknown germline . no 239 .
srip59625 chr2 156527843 156527843 + unknown germline . no 239 .
srip60163 chr2 178676252 178676252 - unknown germline . no 239 PDE11A
srip60532 chr2 181000547 181000547 + unknown germline . no 239 .
srip60790 chr2 191478707 191478707 - unknown germline . no 239 .
srip61925 chr2 221278227 221278227 - unknown germline . no 239 .
srip62346 chr2 230341557 230341557 + unknown germline . no 239 DNER
srip63558 chr20 17369790 17369790 + unknown germline . no 239 PCSK2
srip64042 chr20 25895497 25895497 - unknown germline . no 239 .
srip64071 chr20 25903875 25903875 - unknown germline . no 239 .
srip64784 chr20 41952105 41952105 - unknown germline . no 239 .
srip65572 chr21 14390204 14390204 - unknown germline . no 239 .
srip66934 chr21 29069180 29069180 + unknown germline . no 239 .
srip71908 chr3 38626071 38626071 + unknown germline . no 239 SCN5A
srip72714 chr3 55788574 55788574 + unknown germline . no 239 ERC2
srip73392 chr3 59852896 59852896 + unknown germline . no 239 FHIT
srip73801 chr3 75101217 75101217 + unknown germline . no 239 .
srip74441 chr3 80590169 80590169 - unknown germline . no 239 .
srip75286 chr3 84593281 84593281 - unknown germline . no 239 .
srip75588 chr3 85576556 85576556 + unknown germline . no 239 CADM2
srip77243 chr3 123590719 123590719 + unknown germline . no 239 MYLK
srip77334 chr3 129136183 129136183 . unknown germline . no 239 C3orf25
srip78162 chr3 143121766 143121766 - unknown germline . no 239 SLC9A9
srip78888 chr3 153091090 153091090 + unknown germline . no 239 .
srip79469 chr3 166092232 166092232 + unknown germline . no 239 .
srip80025 chr3 173917220 173917220 - unknown germline . no 239 NLGN1
srip80368 chr3 176091326 176091326 + unknown germline . no 239 .
srip80858 chr3 181192836 181192836 + unknown germline . no 239 .
srip81492 chr3 186372132 186372132 + unknown germline . no 239 .
srip82128 chr3 193354172 193354172 - unknown germline . no 239 OPA1
srip82246 chr4 2456311 2456311 - unknown germline . no 239 LOC402160
srip82464 chr4 14334469 14334469 + unknown germline . no 239 .
srip83001 chr4 18162684 18162684 . unknown germline . no 239 .
srip84633 chr4 46967996 46967996 . unknown germline . no 239 GABRA4
srip84696 chr4 47007786 47007786 - unknown germline . no 239 .
srip85382 chr4 57497060 57497060 - unknown germline . no 239 .
srip86159 chr4 66413931 66413931 + unknown germline . no 239 EPHA5
srip87338 chr4 80768529 80768529 + unknown germline . no 239 GDEP
srip87900 chr4 86607953 86607953 + unknown germline . no 239 ARHGAP24
srip88832 chr4 103343747 103343747 + unknown germline . no 239 .
srip90374 chr4 115395438 115395438 . unknown germline . no 239 .
srip90715 chr4 118765257 118765257 + unknown germline . no 239 .
srip91590 chr4 132181649 132181649 - unknown germline . no 239 .
srip92197 chr4 134596423 134596423 + unknown germline . no 239 .
srip95419 chr4 190841114 190841114 - unknown germline . no 239 .
srip95428 chr4 190895541 190895541 . unknown germline . no 239 .
srip97053 chr5 25584628 25584628 . unknown germline . no 239 .
srip97746 chr5 33633341 33633341 - unknown germline . no 239 ADAMTS12
srip98057 chr5 33797550 33797550 - unknown germline . no 239 ADAMTS12
srip98658 chr5 49541324 49541324 . unknown germline . no 239 .
srip99516 chr5 68263468 68263468 - unknown germline . no 239 .
srip100742 chr5 89450775 89450775 + unknown germline . no 239 .
srip101686 chr5 105935368 105935368 + unknown germline . no 239 .
srip103360 chr5 125040043 125040043 + unknown germline . no 239 .
srip103603 chr5 135023720 135023720 . unknown germline . no 239 .
srip103785 chr5 137014782 137014782 - unknown germline . no 239 KLHL3
srip104866 chr5 154873936 154873936 - unknown germline . no 239 .
srip105259 chr5 155619871 155619871 + unknown germline . no 239 .
srip105732 chr5 160435672 160435672 - unknown germline . no 239 .
srip107513 chr6 13503042 13503042 + unknown germline . no 239 .
srip107939 chr6 32457274 32457274 + unknown germline . no 239 .
srip108000 chr6 32509105 32509105 - unknown germline . no 239 .
srip108172 chr6 39219886 39219886 . unknown germline . no 239 .
srip109130 chr6 57494221 57494221 - unknown germline . no 239 PRIM2
srip109169 chr6 58481772 58481772 - unknown germline . no 239 .
srip109175 chr6 61899342 61899342 . unknown germline . no 239 .
srip110568 chr6 76637533 76637533 + unknown germline . no 239 IMPG1
srip111052 chr6 77980645 77980645 - unknown germline . no 239 .
srip112051 chr6 91669514 91669514 - unknown germline . no 239 .
srip112688 chr6 102283763 102283763 - unknown germline . no 239 GRIK2
srip113804 chr6 142450105 142450105 - unknown germline . no 239 .
srip114424 chr6 148163578 148163578 + unknown germline . no 239 .
srip114770 chr6 148195798 148195798 + unknown germline . no 239 .
srip116058 chr7 5787376 5787376 . unknown germline . no 239 RNF216
srip116066 chr7 6353598 6353598 - unknown germline . no 239 .
srip116205 chr7 10500040 10500040 . unknown germline . no 239 .
srip117021 chr7 42529869 42529869 - unknown germline . no 239 .
srip117454 chr7 52789459 52789459 + unknown germline . no 239 .
srip117631 chr7 53652509 53652509 - unknown germline . no 239 .
srip117899 chr7 57768877 57768877 - unknown germline . no 239 LOC100287663
srip117906 chr7 57813023 57813023 . unknown germline . no 239 LOC100287663
srip117993 chr7 61975100 61975100 . unknown germline . no 239 .
srip118296 chr7 62492938 62492938 + unknown germline . no 239 .
srip119185 chr7 80761427 80761427 . unknown germline . no 239 .
srip119190 chr7 81056086 81056086 . unknown germline . no 239 .
srip119823 chr7 84901724 84901724 - unknown germline . no 239 .
srip120248 chr7 85044744 85044744 + unknown germline . no 239 .
srip120996 chr7 97374630 97374630 . unknown germline . no 239 .
srip121755 chr7 107829256 107829256 + unknown germline . no 239 NRCAM
srip122686 chr7 124451326 124451326 - unknown germline . no 239 .
srip123142 chr7 137225504 137225504 . unknown germline . no 239 DGKI
srip124083 chr8 4452901 4452901 - unknown germline . no 239 CSMD1
srip124396 chr8 5829282 5829282 - unknown germline . no 239 .
srip124831 chr8 11210825 11210825 . unknown germline . no 239 TDH
srip126946 chr8 68185653 68185653 . unknown germline . no 239 ARFGEF1
srip127444 chr8 72399228 72399228 - unknown germline . no 239 .
srip128049 chr8 83827191 83827191 - unknown germline . no 239 .
srip128285 chr8 87315042 87315042 + unknown germline . no 239 .
srip128817 chr8 111262968 111262968 + unknown germline . no 239 .
srip129417 chr8 115881777 115881777 + unknown germline . no 239 .
srip130592 chr9 5023897 5023897 - unknown germline . no 239 JAK2
srip131115 chr9 6290491 6290491 + unknown germline . no 239 .
srip131395 chr9 8344967 8344967 + unknown germline . no 239 PTPRD
srip131735 chr9 19671056 19671056 . unknown germline . no 239 SLC24A2
srip132567 chr9 30674459 30674459 - unknown germline . no 239 .
srip133404 chr9 32463891 32463891 - unknown germline . no 239 DDX58
srip133617 chr9 34904794 34904794 - unknown germline . no 239 .
srip134705 chr9 100675542 100675542 - unknown germline . no 239 C9orf156
srip135889 chr9 118083873 118083873 . unknown germline . no 239 DEC1
srip136014 chr9 121147986 121147986 . unknown germline . no 239 .
srip137230 chrX 54917144 54917144 + unknown germline . no 239 .
srip137797 chrX 61799456 61799456 . unknown germline . no 239 .
srip137798 chrX 61823720 61823720 + unknown germline . no 239 .
srip139781 chrX 98264296 98264296 - unknown germline . no 239 .
srip140085 chrX 102363181 102363181 + unknown germline . no 239 .
srip141054 chrX 122664864 122664864 - unknown germline . no 239 .
srip141367 chrX 129525275 129525275 - unknown germline . no 239 .